To make reactomics data analysis more transparent and reproducible, I included one template in rmwf package. You could install the package from Github.
install.packages('remotes')
remotes::install_github("yufree/rmwf")
If you use RStudio, you could try:
File-New file-R Markdown-from template
Then select ‘reactomics’ to use template for reactomics analysis. Here is a preview for …